Page 233 - 20dynamics of cancer
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218                                                CHAPTER 11

                                            smooth = 0.5                  smooth = 0.6
                                      max = 1        max = 0.7      max = 1       max = 0.7
                                 1  0.7
                               Fraction Tumorless  0.4  0.2




                                 0.1
                                  (a)            (b)            (c)            (d)


                                 −2
                               Incidence

                                 −3
                                  (e)            (f)            (g)            (h)
                                 4
                                 3
                               …LLA  2

                                 1
                                 0  (i)          (j)            (k)            (l)
                                  30  40  50  60  80  30  40  50  60  80  30  40  50  60  80  30  40  50  60  80
                                                              Age

                              Figure 11.3  Breast cancer rates for females who carry a mutation in BRCA1 or
                              BRCA2, shown as solid lines, versus those females who do not have a mutation,
                              shown as dashed lines. The circles in (a) and (c) mark the estimated fraction of
                              females in each class that have not yet developed tumors, taken from Figure 1B
                              of Struewing et al. (1997). In (b) and (d), I transformed the fraction tumorless,
                              f,as S = (max − f)/max, where max is the fraction of the carriers who have
                              fully elevated risk. Panels (a) and (b) used the smooth.spline function of the
                              R computing language (R Development Core Team 2004) to fit a smooth curve
                              to the observed points, with smoothing parameter set to 0.5; (c) and (d) force
                              a stiffer, less curved fit with a smoothing parameter of 0.6. The second row
                              shows incidence on a log 10 scale, obtained from −dln(S)/dt, where S is the
                              fraction tumorless in the curves of the top row. The bottom row shows ΔLLA,
                              the difference in the log-log slopes of incidence in the second row of plots.
                              for carriers and noncarriers. In all four panels, the noncarriers (dashed
                              curve) show the commonly observed pattern for sporadic breast cancer:
                              a diminishing slope of incidence with age, but little or no actual decrease
                              in the incidence rate before age 80. By contrast, the incidence declines
                              after midlife for the carriers (solid curves) in all of the panels except
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