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INHERITANCE                                                 215

                              been limited to indirect analysis of multiple sites by associations be-
                              tween familial relationships and incidence, the classical nonmolecular
                              approach to quantitative inheritance.




                                                VARIANTS AT A SINGLE LOCUS

                                This section compares progression and incidence between individu-
                              als who carry, at a single locus, either the wild-type allele or a loss of
                              function mutation. In most cases, one compares homozygotes for the
                              wild type and heterozygotes that carry one wild-type and one loss of
                              function mutation. In practice, “wild type” means the class of all variant
                              alleles that do not have a large effect on incidence, and “loss of function”
                              means the class of all variant alleles that cause a large increase in the
                              rate of progression.
                                The comparison between individuals carrying wild-type and loss of
                              function genotypes played a key role in the history of multistage theo-
                              ries of carcinogenesis. The shift of the incidence curve to earlier ages
                              in the loss of function genotypes provided the first direct evidence that
                              mutations in cell lineages affect progression. The observed magnitude
                              of the shift in incidence curves matched the expected shift under multi-
                              stage theory. In that theory, progression follows the accumulation of
                              multiple genetic changes, and the inherited mutation provides the first
                              of two or more steps in carcinogenesis.
                                In earlier chapters, I described studies that compared age incidence
                              between genotypes that differed at a single locus, comparing the wild-
                              type with loss of function mutations. In this section, I copy the figures
                              from two earlier examples. The following sections provide new exam-
                              ples.
                                Figure 11.1 compares incidence rates between inherited and sporadic
                              cases of retinoblastoma. In the inherited cases, individuals carry one
                              mutated allele at the retinoblastoma locus. Within the multistage frame-
                              work, inheriting a key mutation means being born one stage advanced in
                              progression. The theory predicts that an advance by one stage reduces
                              the slope of the incidence curve by one. The difference in the log-log ac-
                              celeration (LLA) of the two incidence curves measures the difference in
                              the slopes of the incidence curves. Figure 11.1c shows that the observed
                              difference in slopes is close to one, matching the theory’s prediction.
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