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Cell Signalling Biology Michael J. Berridge  Module 2  Cell Signalling Pathways                2  41




             Module 2:  Table inositol lipid kinases and phosphatases
             Inositol lipid kinases and phosphatases
                                             Substrate         Product            Comments
             Inositol lipid kinases
             Class III PtdIns 3-kinase       PtdIns            PtdIns3P           Also known as hVps34 (Step 1 in
                                                                                   Module 2: Figure phosphoinositide
                                                                                   metabolism). Functions in protein
                                                                                   trafficking (Module 2: Figure
                                                                                   localized inositol lipid signalling)
             Phosphatidylinositol 4-kinase (PtdIns                                Step 2 in Module 2: Figure
               4-K)                                                                phosphoinositide metabolism.
               PtdIns 4-KIIα                 PtdIns            PtdIns4P
               PtdIns 4-KIIβ                 PtdIns            PtdIns4P
               PtdIns 4-KIIIα                                  PtdIns4P
               PtdIns 4-KIIIβ                                  PtdIns4P
             Phosphatidylinositol 5-kinase (PtdIns  PtdIns     PtdIns5P           Step 3 in Module 2: Figure
               5-K)                                                                phosphoinositide metabolism.
             Class II PtdIns 3-kinase        PtdIns            PtdIns3P           Step 5 in Module 2: Figure
                                             PtdIns4P          PtdIns3,4P 2        phosphoinositide metabolism.
             Phosphatidylinositol4P 5-kinase                                      Step 8 in Module 2: Figure
               (PtdIns4P 5-K) Type I                                               phosphoinositide metabolism
               PtdIns4P 5-KIα                PtdIns4P          PtdIns4,5P 2       .
               PtdIns4P 5-KIβ                PtdIns4P          PtdIns4,5P 2
               PtdIns4P 5-KIγ                PtdIns4P          PtdIns4,5P 2
             PhosphatidylinositolP kinase (PtdInsP  PtdIns3P   PtdIns3,4P 2       Step 6 in Module 2: Figure
               4-K) Type II                                                        phosphoinositide metabolism.
                                             PtdIns5P          PtdIns4,5P 2
             PhosphatidylinositolP 5-kinase  PtdIns3P          PtdIns3,5P 2       Step 4 in Module 2: Figure
               (PIKfyve) Type III                                                  phosphoinositide metabolism.
                                                                                   Functions in protein trafficking
                                                                                   (Module 2: Figure localized inositol
                                                                                   lipid signalling). Mutations of this
                                                                                   kinase are associated with
                                                                                   Francois--Neetens mouchetee fleck
                                                                                   corneal dystrophy (CFD)
             Class I PtdIns 3-kinases                                             Step 10 in Module 2: Figure
                                                                                   phosphoinositide metabolism.
             Class IA PtdIns 3-kinase
               p110α (catalytic subunit)     PtdIns4,5P 2      PtdIns3,4,5P 3     The structure of these lipid kinases is
                                                                                   shown in Module 2: Figure PI3-K
                                                                                   family
               p110β (catalytic subunit)     PtdIns4,5P 2      PtdIns3,4,5P 3
               p110δ (catalytic subunit)     PtdIns4,5P 2      PtdIns3,4,5P 3
               p85α (regulatory subunit)
               p85β(regulatory subunit)
               p55α(regulatory subunit)
               p50(regulatory subunit)
               p55γ(regulatory subunit)
             Class IB PtdIns 3-kinase
               p110γ                         PtdIns4,5P 2      PtdIns3,4,5P 3
               p84 (regulatory subunit)
               p101 (regulatory subunit)
             Class II PtdIns 3-kinase
               PtdIns 3KC2α                  PtdIns4,5P 2      PtdIns3,4,5P 3
               PtdIns 3KC2β                  PtdIns4,5P 2      PtdIns3,4,5P 3
               PtdIns 3KC2γ                  PtdIns4,5P 2      PtdIns3,4,5P 3
             Inositol lipid phosphatases
             Src homology 2 (SH2)                                                 Step 7 in Module 2: Figure
               domain-containing inositol                                          phosphoinositide metabolism.
               phosphatase (SHIP)
               SHIP1                         PtdIns3,4,5P 3    PtdIns3,4,P 2
               SHIP2                         PtdIns3,4,5P 3    PtdIns3,4,P 2
             Phosphatase and tensin homologue  PtdIns3,4P 2    PtdIns4P           Step 9 in Module 2: Figure
               deleted on chromosome 10 (PTEN)                                     phosphoinositide metabolism.
                                                                                  This lipid phosphatase is mutated in
                                             PtdIns3,4,5P 3    PtdIns4,5P 2
                                                                                   many human cancers
             Myotubularins (MTMR1--MTMR13)                                        Step 11 in Module 2: Figure
                                                                                   phosphoinositide metabolism.
               MTM1                          PtdIns3           PtdIns             Mutations of MTM1 are responsible for
                                                                                   X-linked recessive myotubular
                                                                                   myopathy
               MTM2                          PtdIns3           PtdIns             MTMR2 is mutated in
                                                                                   Charcot--Marie--Tooth disease 4B










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