Page 16 - Microsoft Word - Lund BioinorgChem 08.doc
P. 16

16


               converted to volatile H 2S with acids. The mean oxidation state in the reduced form is 2.25, in
               the oxidised form 2.5, the redox potential is typically around -200 mV. (4) HiPIPs (High
               Potential Iron Proteins) are identical to the [4Fe,4S] ferredoxins in as far as the core structure is
               concerned. However, the mean oxidation state in the reduced form is 2.5, in the oxidised from
               2.75, and the redox potential is typically around +300 mV. Along with these “classical” iron-
               sulphur clusters, others are know, in which one iron centre is missing ([3Fe,4S] ferredoxins), or
               where two [4Fe,4S] ferredoxins form double-cubanes, or where a fifth ligand (Ser or His) is
               coordinated to one of the iron centres. The Rieske proteins have already been mentioned
               above; the angle N-Fe-N is ca. 90°, i.e. there is strong distortion from tetrahedral symmetry for
               this specific iron.
                                      2-/-                                             (His)  ]1-/0
                           SR     SR         SR      S     SR   3-/2-     SR      S     N
                              Fe                 Fe     Fe                    Fe     Fe
                          SR     SR          SR      S      SR            SR      S      N
                                                                                        (His)
                          Rubredoxin          [2Fe-2S]-Ferredoxin       Rieske centre
                                                                          Rieske-Zentrum


                                    SR               3-/2-     SR              2-/-
                                        Fe    S  SR                Fe     S  SR
                                      S     Fe                   S     Fe
                                         S    Fe  SR                S     Fe  SR
                                      Fe    S                    Fe    S
                                    SR                         SR

                                   [4Fe-4S]-Ferredoxin              HiPIP
               Figure 11. The iron centres of the classical (and more frequently used) iron-sulphur proteins.
               SR = cysteinate(1-).


                 Tutorial: Oxidation and reduction

                 An oxidation corresponds to  a removal of electrons (increase of the oxidation number),
                 reduction correspondingly to a transfer of electrons to a substrate (decrease of the oxidation
                 number). Oxidation and reduction are coupled; an example is the oxidation of ferrous to ferric
                 iron, coupled with the reduction of oxygen to water:
                     2Fe  + ½O 2 + 2H   →  2Fe  + H 2O
                         2+
                                       +
                                                3+

              In principal, all redox reactions are equilibrium reactions. The direction is determined by the

              redox potentials of the two pairs of underlying  electron transfer processes. Standard redox
                                                                          5

                          0
              potentials E  are tabulated; standard conditions are: 298 K, 10  Pa, c = 1 mol/l:
                                                                2+
                                                    3+
                                                                     0
                                                         -
                                                  Fe  + e  ' Fe ;  E  = +0.771 V
                                                  ½O 2 + 2e  + 2H  ' H 2O;  E  = +1.229 V
                                                           -
                                                                             0

                                                                 +

                                                                   c

              Recalculation of the potential for real concentrations, E , is achieved with the Nernst equation:

                     E  = E  + (0.059/n)log(c Ox/c Red)
                       c
                            0


              where n is the number of transferred electrons; c Ox and c Red the concentrations of the oxidised

              and reduced forms, respectively. In particular, the pH dependence has to be taken into account:
                                                                        0
                            +

                                  -7
                                                         +
                                       c
              At pH 7, (c(H ) = 10 ), E  for the pair H 2/H  is -0.414 V (E  = 0), for H 2O/O 2 +0.815 V.
   11   12   13   14   15   16   17   18   19   20   21